Jeff M. Coller : rechercher sur Z-Library

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1

Codon Optimality Is a Major Determinant of mRNA Stability

Presnyak, Vladimir, Alhusaini, Najwa, Chen, Ying-Hsin, Martin, Sophie, Morris, Nathan, Kline, Nicholas, Olson, Sara, Weinberg, David, Baker, Kristian E., Graveley, Brenton R., Coller, Jeff

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 3.30 MB

english, 2015

2

Codon optimality, bias and usage in translation and mRNA decay

Hanson, Gavin, Coller, Jeff

Journal:

Nature Reviews Molecular Cell Biology

Année:

2017

Langue:

english

Fichier:

PDF, 1.46 MB

english, 2017

3

Co-translational mRNA decay in Saccharomyces cerevisiae

Hu, Wenqian, Sweet, Thomas J., Chamnongpol, Sangpen, Baker, Kristian E., Coller, Jeff

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 584 KB

english, 2009

4

E UKARYOTIC mRNA D ECAPPING

Coller, Jeff, Parker, Roy

Journal:

Annual Review of Biochemistry

Année:

2004

Langue:

english

Fichier:

PDF, 1018 KB

english, 2004

5

RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts

Geisler, Sarah, Coller, Jeff

Journal:

Nature Reviews Molecular Cell Biology

Année:

2013

Langue:

english

Fichier:

PDF, 1009 KB

english, 2013

6

Nonsense-mediated mRNA decapping occurs on polyribosomes in Saccharomyces cerevisiae

Hu, Wenqian, Petzold, Christine, Coller, Jeff, Baker, Kristian E

Journal:

Nature Structural and Molecular Biology

Année:

2010

Langue:

english

Fichier:

PDF, 752 KB

english, 2010

7

What comes first: translational repression or mRNA degradation? The deepening mystery of microRNA function

Hu, Wenqian, Coller, Jeff

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 387 KB

english, 2012

8

General Translational Repression by Activators of mRNA Decapping

Jeff Coller, Roy Parker

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 647 KB

english, 2005

9

Alternate Endings: A New Story for mRNA Decapping

Sarah Geisler, Jeff Coller

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 248 KB

english, 2010

10

Decapping of Long Noncoding RNAs Regulates Inducible Genes

Sarah Geisler, Lisa Lojek, Ahmad M. Khalil, Kristian E. Baker, Jeff Coller

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2012

11

Staufen- and FMRP-Containing Neuronal RNPs Are Structurally and Functionally Related to Somatic P Bodies

Scott A. Barbee, Patricia S. Estes, Anne-Marie Cziko, Jens Hillebrand, Rene A. Luedeman, Jeff M. Coller, Nick Johnson, Iris C. Howlett, Cuiyun Geng, Ryu Ueda, Andrea H. Brand, Sarah F. Newbury, James

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2006

12

The many routes to regulating mRNA translation

Kristian E Baker, Jeff Coller

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 95 KB

english, 2006

13

[Methods in Enzymology] RNA Turnover in Eukaryotes: Nucleases, Pathways and Analysis of mRNA Decay Volume 448 || Chapter 14 Methods to Determine mRNA Half‐Life in Saccharomyces cerevisiae

Année:

2008

Langue:

english

Fichier:

PDF, 403 KB

english, 2008

14

ACTIVE TGF-BETA-1 IS MORE COMMONLY DETECTABLE IN PLASMA OF PATIENTS WITH AORTIC STENOSIS THAN CARDIAC CATHETERIZATION CONTROLS

Bander, Jeff, Mauer, Andreas, Huffman, Christopher, Sharma, Samin, Coller, Barry, Ahamed, Jasimuddin

Journal:

Journal of the American College of Cardiology

Année:

2011

Langue:

english

Fichier:

PDF, 264 KB

english, 2011

15

The DHH1/RCKp54 family of helicases: An ancient family of proteins that promote translational silencing

Presnyak, Vlad, Coller, Jeff

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Année:

2013

Langue:

english

Fichier:

PDF, 533 KB

english, 2013

16

Translation of Small Open Reading Frames within Unannotated RNA Transcripts in Saccharomyces cerevisiae

Smith, Jenna E., Alvarez-Dominguez, Juan R., Kline, Nicholas, Huynh, Nathan J., Geisler, Sarah, Hu, Wenqian, Coller, Jeff, Baker, Kristian E.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2014

17

PAN-orama: three convergent views of a eukaryotic deadenylase

Martin, Sophie, Coller, Jeff

Journal:

Nature Structural and Molecular Biology

Année:

2014

Langue:

english

Fichier:

PDF, 286 KB

english, 2014

18

A novel origin for granulovacuolar degeneration in aging and Alzheimer's disease: parallels to stress granules

Castellani, Rudy J, Gupta, Yashi, Sheng, Baiyang, Siedlak, Sandra L, Harris, Peggy LR, Coller, Jeff M, Perry, George, Lee, Hyoung-gon, Tabaton, Massimo, Smith, Mark A, Wang, Xinglong, Zhu, Xiongwei

Journal:

Laboratory Investigation

Année:

2011

Langue:

english

Fichier:

PDF, 649 KB

english, 2011

19

Molecular Biology of Long Non-coding RNAs ||

Khalil, Ahmad M., Coller, Jeff

Année:

2013

Langue:

english

Fichier:

PDF, 3.50 MB

english, 2013

20

Molecular Biology of Long Non-coding RNAs || Dysregulation of Long Non-coding RNAs in Human Disease

Khalil, Ahmad M., Coller, Jeff

Année:

2013

Langue:

english

Fichier:

PDF, 578 KB

english, 2013

21

Stress-Induced Nuclear RNA Degradation Pathways Regulate Yeast Bromodomain Factor 2 to Promote Cell Survival

Roy, Kevin, Chanfreau, Guillaume, Coller, Jeff

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.62 MB

english, 2014

22

A Method that Will Captivate U

Martin, Sophie, Coller, Jeff

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 191 KB

english, 2015

23

RNA research in the rustbelt

Coller, Jeff, Rueda, David

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 259 KB

english, 2009

24

The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality

Radhakrishnan, Aditya, Chen, Ying-Hsin, Martin, Sophie, Alhusaini, Najwa, Green, Rachel, Coller, Jeff

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 2.35 MB

english, 2016

25

A Universal Code for mRNA Stability?

Chen, Ying-Hsin, Coller, Jeff

Journal:

Trends in Genetics

Année:

2016

Langue:

english

Fichier:

PDF, 365 KB

english, 2016

26

mRNA decapping in 3D

Journal:

Nature Structural and Molecular Biology

Année:

2016

Langue:

english

Fichier:

PDF, 531 KB

english, 2016

27

Short poly(A) tails are a conserved feature of highly expressed genes

Lima, Sarah Azoubel, Chipman, Laura B, Nicholson, Angela L, Chen, Ying-Hsin, Yee, Brian A, Yeo, Gene W, Coller, Jeff, Pasquinelli, Amy E

Journal:

Nature Structural and Molecular Biology

Année:

2017

Langue:

english

Fichier:

PDF, 938 KB

english, 2017

28

The analysis of translational mechanisms that modulate gene expression

Coller, Jeff, Grayhack, Elizabeth J

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 265 KB

english, 2018

29

Translation elongation and mRNA stability are coupled through the ribosomal A-site

Hanson, Gavin, Alhusaini, Najwa, Morris, Nathan, Sweet, Thomas, Coller, Jeff

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 2.49 MB

english, 2018

30

Attenuated Codon Optimality Contributes to Neural-Specific mRNA Decay in Drosophila

Burow, Dana A., Martin, Sophie, Quail, Jade F., Alhusaini, Najwa, Coller, Jeff, Cleary, Michael D.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 2.94 MB

english, 2018

31

Lso2 is a conserved ribosome-bound protein required for translational recovery in yeast

Wang, Yinuo J., Vaidyanathan, Pavanapuresan P., Rojas-Duran, Maria F., Udeshi, Namrata D., Bartoli, Kristen M., Carr, Steven A., Gilbert, Wendy V., Coller, Jeff

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 18.37 MB

english, 2018

32

Structural and molecular mechanisms for the control of eukaryotic 5′–3′ mRNA decay

Mugridge, Jeffrey S., Coller, Jeff, Gross, John D.

Journal:

Nature Structural and Molecular Biology

Année:

2018

Langue:

english

Fichier:

PDF, 1.73 MB

english, 2018

33

mRNA association by aminoacyl tRNA synthetase occurs at a putative anticodon mimic and autoregulates translation in response to tRNA levels

Levi, Ofri, Arava, Yoav, Coller, Jeff

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 4.44 MB

english, 2019

34

Codon and amino acid content are associated with mRNA stability in mammalian cells

Forrest, Megan E., Pinkard, Otis, Martin, Sophie, Sweet, Thomas J., Hanson, Gavin, Coller, Jeff, Kim, Yoon Ki

Journal:

Année:

2020

Fichier:

PDF, 3.46 MB

2020

35

Quantitative tRNA-sequencing uncovers metazoan tissue-specific tRNA regulation

Pinkard, Otis, McFarland, Sean, Sweet, Thomas, Coller, Jeff

Journal:

Nature Communications

Année:

2020

Fichier:

PDF, 1.29 MB

2020